PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953326.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 352aa    MW: 38873 Da    PI: 6.0483
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953326.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.35.6e-08256296954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r+RR+ri +++  L++++P        K++ a++L +A +Y+k L
  XP_022953326.1 256 ARQRRERISERIRVLQRIVPGG-----SKMDTASMLDEAANYLKFL 296
                     69******************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MDHLSWDGYG SRATTNTPPP SSSSFWSNYQ QGHEQRFMIS NNSNSPNFFN SVQDLPTSNM  60
DVVGLETQLL TSFNGDKTAT ATAATCSLES LDCLLSATNS NTDTSIEDDG SVSMMLSDYT  120
NLWNFGGNAA PSSKRSHDQT HIKPTEYSVF SNNIITLSDS TSNSEGFKII TDQNLPKQKK  180
PRSEKPPNSS NINFQQSCSS GSSCIDQEPD PEAIAQMKEM IYRAAAFRPV NLGLEAIEKP  240
KRKNVRISTD PQTVAARQRR ERISERIRVL QRIVPGGSKM DTASMLDEAA NYLKFLKSQI  300
KALENLGQKI ESLNCPSNTI AFSFNPSFPI QTSSSSSSHN NFSLQNPYDQ LM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1257262RQRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.12e-69bHLH family protein