PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953371.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 837aa    MW: 92246.7 Da    PI: 6.4329
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953371.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.41.2e-181775357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022953371.1 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 75
                    5679*****************************************************97 PP
2START181.16.2e-571613692205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d + W ++++++++l+v+ ++  g+++l 
  XP_022953371.1 161 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPT-RVAEILKDQPSWFRDCRAVDVLNVLPTAngGTIELL 254
                     789*******************************************************.9999999999****************9999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++vi+++S+ ++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_022953371.1 255 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVICERSLKNTQNGPTmppVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 349
                     *******************************************9998899********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+++ ++k+++a+l+++++
  XP_022953371.1 350 ESSTVLAQKMTMAALRQLRQ 369
                     ****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 837 aa     Download sequence    
MAMSCKDGNK HGIDNGKYVR YTPEQVEALE RLYHECPKPS SIRRQQLIRE CPILSNIEPK  60
QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN DRLQKQVSQL VYENGYFRQH  120
TQNTTLGAKD TSCEPVVTSG QHNLASQHPP RDASPAGLLS IAEETLTEFL SKATGTAVEW  180
VQMPGMKPGP DSIGIVAISH GCPGVAARAC GLVGLEPTRV AEILKDQPSW FRDCRAVDVL  240
NVLPTANGGT IELLYMQLYA PTTLAPARDF WLLRYTSVLE DGSLVICERS LKNTQNGPTM  300
PPVQHFVRAE MLPSGYLIRP CEGGGSIIHI VDHMDLEPWS VPEVLRPLYE SSTVLAQKMT  360
MAALRQLRQI AHEVSQSNGT GWSRRPAALR SLGQRLTRGF NEALNGFNDE GWSVMGNDGM  420
DDVTILVNSS PDKLMGLNIS FANGFSAISN AVLCARASML LQNVPPAILL RFLREHRSEW  480
ADNNIDAYSA AAVKVGPWSL PGSRVGSFGN QVILPLAHTI EHEEFLEVIK LEGIGHTPEE  540
AMMPREMFLL QLCSGMDENA IGTCAELIFA PIDASFADDA PLLPSGFRII PLDSGKEASS  600
PNRTLDLASA LEIGPAGNRA PNDSVNSGCS RSVMTIAFEF AFESHMQEHV ASMARQYVRS  660
IISSVQRVAL ALSPSHLSSH GGLRSPLGTP EAQTLARWIC NSYRCYLGVE ILKSGIEGGE  720
LVLKTLWHHS DAIMCCSLKA LPVFTFANQA GLDMLETTLV ALQDITLEKI FDDHGKKTLC  780
SEFPQIMQQG FACLQGGICL SSMGRPVSYE RAVAWKVLNE EENAHCICFM FVNWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein