PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953376.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 345aa    MW: 38035.5 Da    PI: 7.1031
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953376.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding422.2e-13106150347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_022953376.1 106 PWTEEEHRLFLVGLQKLGKGDWRGISRNFVITRTPTQVASHAQKY 150
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPS RGGSGGGSGG VKLFGVRLTD GSFIKKSASM GNLSVHYHSS  60
SSAAASPNPD SPNSDPVHDT DGFLSDDTTH ASCSANRRGE RKKGVPWTEE EHRLFLVGLQ  120
KLGKGDWRGI SRNFVITRTP TQVASHAQKY FIRQSNSTRR KRRSSLFDMV PEMASDPLPM  180
PEDGVLHASQ AKETENSSSQ PSLNLSLNSE FHMMETTVEE NGNELDATKM EVAGFPPMIP  240
GFIPAYMPVP FRIWAPSTFP MEEEKGVEMC HHEVLRPIPV VLKEPVNVDE LVGLSQLTLR  300
EHEGEHREHS PLSLRLIGEG SRQSAFHPKT PVSRSNLNKD DNDTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.15e-88MYB_related family protein