PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953567.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 293aa    MW: 32486.1 Da    PI: 7.532
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953567.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.15.9e-33125181158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e ekk+ +ksrkpylheSRh hA+rR+RgsgGrF
  XP_022953567.1 125 EEPVYVNAKQYHGILRRRQSRAKAELEKKV-IKSRKPYLHESRHLHAMRRARGSGGRF 181
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MPSKPENVDQ QIVDGSKYLV QSTKYSGAWW NGVGNNTIAG EDATKTASAD YLNDTVSSGG  60
TQSQGNDENI GKEVQHLKYI PFSASPPVGE RLDLNSQMEL VGHSIFPHIY GLHHARMPLP  120
LEMEEEPVYV NAKQYHGILR RRQSRAKAEL EKKVIKSRKP YLHESRHLHA MRRARGSGGR  180
FLNTKKPNNV ISNTDREEGI NSGANHSTKP VSEAGSKYMA ADENGIKDTL NEEDKEFMTQ  240
NLQITRAFFN GKLNGHGIST YTSQLADVEG GHLDQPHESM QVNGAPQRAI PIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.12e-30NF-YA family protein