PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953744.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 328aa    MW: 36764.9 Da    PI: 9.9585
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953744.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.44.7e-31262319359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+
  XP_022953744.1 262 DDFSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 319
                     99***********************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MEEVEDANRE AVESVHKVLN LLTVTSPQDQ SKITRCLMTE TGEAVFKFRK VLCLLDSVGL  60
GHARVRKKKK IMNFHLDSSP SQSMFLESSS PNCRMDLLQG RNLQMGPHPS LELNSNAKNC  120
SIQQIQPQSA AVYHHLLQNR VLLNTQQPEM GYLRSNSGVN LNFDSSSCTQ HTMSSTRSFM  180
SSLSIDGSVA NLDGSGFHLI GTPRSSDQNS RHKRKCCRRG EDGSVKCGSS GRCHCSKKRK  240
HRVKRSIKVP AISNKLADIP PDDFSWRKYG QKPIKGSPHP RGYYKCSSMR GCPARKHVER  300
CLEEPSMLIV TYEGEHNHPR IASQFPNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.12e-97WRKY family protein