PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022953791.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 654aa MW: 72150.4 Da PI: 6.3458

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022953791.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.7	0.0005	486	523	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq XP_022953791.1 486 RQLIQDRIKELRELVPNgA------KCSIDSLLERTIKHMLFLQ 523 67799************77......7777779999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 654 aa Download sequence
MGTADLHQIL KSFCFNSEWK YAVFWKLKHR ARMMLTWEDG YYDNSEQYEP STSKFYRKTV 60 EKFHDGHYSH DPLGLAVAKM SYHVYSLGEG IVGQVAVTGK HQWITAADEQ IPNISSTLEY 120 CDGWQTQFLA GIKTIVVVAV VPHGVLQLGS LDKVTEDVNV VAHIRNVFLT LQESSAGHIE 180 PMPSCKSSGY MKSEDESVSK NVGIELSGSG GNESLRTQPD AINVESFKSK ARFLDDRICG 240 GVPSGYKDMA VDLKQKCNAP SQNSAMDITN DACFPVNHNA MLSRTNPTEM YLQNDVEASQ 300 DGCPSNASLK FPAGYELHEV LGPAFLKDAL HLDWQTEYVF GGRASNLSEG MSSSQLTSDS 360 PMEHLLEAVV ADVCYSGSDV KSDTSLCKSG QSRLTSERIP EPSTNVTTSA CSEGYSMGQS 420 RTSFIGEDMP NSLSSSGICG VMSPKGFSST YSGTGSERLE KSSEPGKNSK RRARPGESCR 480 PRPRDRQLIQ DRIKELRELV PNGAKCSIDS LLERTIKHML FLQGITKHVD KLNKCANMKL 540 HQKENGRMGT SNTDQGSSWA VEVGGQLKVC SIIVENLNKN GQILVEMLCE ECSHFLEIAE 600 AIRSLGLTIL KGITEAHGDK TWICFVVEGE NNRNIHRMDI LWSLVQILQR SNTS

Sequence ? help Back to Top

Protein Sequence Length: 654 aa Download sequence

MGTADLHQIL KSFCFNSEWK YAVFWKLKHR ARMMLTWEDG YYDNSEQYEP STSKFYRKTV  60
EKFHDGHYSH DPLGLAVAKM SYHVYSLGEG IVGQVAVTGK HQWITAADEQ IPNISSTLEY  120
CDGWQTQFLA GIKTIVVVAV VPHGVLQLGS LDKVTEDVNV VAHIRNVFLT LQESSAGHIE  180
PMPSCKSSGY MKSEDESVSK NVGIELSGSG GNESLRTQPD AINVESFKSK ARFLDDRICG  240
GVPSGYKDMA VDLKQKCNAP SQNSAMDITN DACFPVNHNA MLSRTNPTEM YLQNDVEASQ  300
DGCPSNASLK FPAGYELHEV LGPAFLKDAL HLDWQTEYVF GGRASNLSEG MSSSQLTSDS  360
PMEHLLEAVV ADVCYSGSDV KSDTSLCKSG QSRLTSERIP EPSTNVTTSA CSEGYSMGQS  420
RTSFIGEDMP NSLSSSGICG VMSPKGFSST YSGTGSERLE KSSEPGKNSK RRARPGESCR  480
PRPRDRQLIQ DRIKELRELV PNGAKCSIDS LLERTIKHML FLQGITKHVD KLNKCANMKL  540
HQKENGRMGT SNTDQGSSWA VEVGGQLKVC SIIVENLNKN GQILVEMLCE ECSHFLEIAE  600
AIRSLGLTIL KGITEAHGDK TWICFVVEGE NNRNIHRMDI LWSLVQILQR SNTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	1e-103	bHLH family protein