PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953800.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 390aa    MW: 43089.5 Da    PI: 4.6834
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953800.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-19114163255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a +++++g
  XP_022953800.1 114 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRG 163
                     69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MCGGALISGF IPTTHSRRVT GEHLWPNLKK PGFGNQLSKP VKSDIIDIDD DFETDFQHFK  60
DDSDLEFDVE ELVDVKSFAF SAGGSPAVPS ARASKSVDFS GQAEKSAKRK RKNQYRGIRQ  120
RPWGKWAAEI RDPRKGVRVW LGTFNTAEEA ARAYDAEARR IRGKKAKVNF PNEAPRTSGK  180
RLSKTNLQEP VVKTSLAKTQ SDQIQNNGFV SNSDEDYYST VGFLDEKPLT NQLVNMNSFP  240
ANTDVAIKTS PPSSDVAPMY FNSDQGSNSF EYSDFGWGEQ GAKTPEISSF LSAAMENEDS  300
YFVEDASPSK KVKYSPETME VSQGSGKTLS EELSSFESEM KYFQMPYLDG SWDASMDAFL  360
AGETGNQDGG VNSVDLWSFD DFSGMVGSAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.33e-79ERF family protein