PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022953860.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 693aa MW: 77109.3 Da PI: 6.3215

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022953860.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	66.6	3.5e-21	551	648	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ l +ed ++r+W+++++y ++ks++y+l+ ++ +Fv+angL+egDf+v++ ++ +++ XP_022953860.1 551 QKVLKQSDVGNLGRIVLPKKEAESHlpELEARDGISLAMEDiGTSRVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDvKCG 642 79***********************999999****7778*****777777777777.******************..566999 PP ..EEEE CS B3 91 elvvkv 96 +++++ XP_022953860.1 643 KYMIRG 648 888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MKEVHDLDLH AEMDQTQMWV HDQNQQEQEQ QHENHQIFLS DNDDDALMFY SDFPPLPDFP 60 CMSSSSSSTP APVKPTVSLS SSSSTSSSSS ATSWAVLKSD ADEIAEEIRI NDDNSAAAAA 120 VSSPTAVKTE FNGGDCTDDM MMETFGYMDL LEDSNEFFDP TCIFQNEQQQ RDPIEDLQLE 180 SFEEVEMEDL MMMHGGESND NGGKQNVAAV AAAAAAAAEE EDMAKVFLEW LRSNRETVSA 240 DDLRNVRIKK ATIESAARRL GGGKEGMKQL LKLVLEWVQT NHLHKRKFKE INENEANLIG 300 FQNPNSSGHP WIQTPPPLPP RPLYSPPILG YVQGGGGEAY GGGRGYSDHY QLLDSSLSWS 360 NSNRNSNSNL PGQFGLPPSH FNSFVDNFVA GPPLPPPQPQ GFTAGYGRGQ QYPYIGQYFQ 420 AQGGDNGLVR LDSSATKEAR KKRMARQRRF SAHHRHNHSG HHGNHHHHSN SHQNQMNPNA 480 TDHCNMATTS QPNAGNWVYW PSSTDVVPAD SPVHIVNRSN SSLQNQPYPP RIQSDRRQGW 540 KPEKNLRFLL QKVLKQSDVG NLGRIVLPKK EAESHLPELE ARDGISLAME DIGTSRVWNM 600 RYRYWPNNKS RMYLLENTGD FVRANGLQEG DFIVIYSDVK CGKYMIRGVK VRQPGSKPDS 660 KRGGKSQRSH STAGVNANGL SSSPPTPATP RRL

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MKEVHDLDLH AEMDQTQMWV HDQNQQEQEQ QHENHQIFLS DNDDDALMFY SDFPPLPDFP  60
CMSSSSSSTP APVKPTVSLS SSSSTSSSSS ATSWAVLKSD ADEIAEEIRI NDDNSAAAAA  120
VSSPTAVKTE FNGGDCTDDM MMETFGYMDL LEDSNEFFDP TCIFQNEQQQ RDPIEDLQLE  180
SFEEVEMEDL MMMHGGESND NGGKQNVAAV AAAAAAAAEE EDMAKVFLEW LRSNRETVSA  240
DDLRNVRIKK ATIESAARRL GGGKEGMKQL LKLVLEWVQT NHLHKRKFKE INENEANLIG  300
FQNPNSSGHP WIQTPPPLPP RPLYSPPILG YVQGGGGEAY GGGRGYSDHY QLLDSSLSWS  360
NSNRNSNSNL PGQFGLPPSH FNSFVDNFVA GPPLPPPQPQ GFTAGYGRGQ QYPYIGQYFQ  420
AQGGDNGLVR LDSSATKEAR KKRMARQRRF SAHHRHNHSG HHGNHHHHSN SHQNQMNPNA  480
TDHCNMATTS QPNAGNWVYW PSSTDVVPAD SPVHIVNRSN SSLQNQPYPP RIQSDRRQGW  540
KPEKNLRFLL QKVLKQSDVG NLGRIVLPKK EAESHLPELE ARDGISLAME DIGTSRVWNM  600
RYRYWPNNKS RMYLLENTGD FVRANGLQEG DFIVIYSDVK CGKYMIRGVK VRQPGSKPDS  660
KRGGKSQRSH STAGVNANGL SSSPPTPATP RRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-94	B3 family protein