PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022953861.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 681aa MW: 75690.7 Da PI: 6.4447

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022953861.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	66.7	3.4e-21	539	636	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ l +ed ++r+W+++++y ++ks++y+l+ ++ +Fv+angL+egDf+v++ ++ +++ XP_022953861.1 539 QKVLKQSDVGNLGRIVLPKKEAESHlpELEARDGISLAMEDiGTSRVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDvKCG 630 79***********************999999****7778*****777777777777.******************..566999 PP ..EEEE CS B3 91 elvvkv 96 +++++ XP_022953861.1 631 KYMIRG 636 888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
MDQTQMWVHD QNQQEQEQQH ENHQIFLSDN DDDALMFYSD FPPLPDFPCM SSSSSSTPAP 60 VKPTVSLSSS SSTSSSSSAT SWAVLKSDAD EIAEEIRIND DNSAAAAAVS SPTAVKTEFN 120 GGDCTDDMMM ETFGYMDLLE DSNEFFDPTC IFQNEQQQRD PIEDLQLESF EEVEMEDLMM 180 MHGGESNDNG GKQNVAAVAA AAAAAAEEED MAKVFLEWLR SNRETVSADD LRNVRIKKAT 240 IESAARRLGG GKEGMKQLLK LVLEWVQTNH LHKRKFKEIN ENEANLIGFQ NPNSSGHPWI 300 QTPPPLPPRP LYSPPILGYV QGGGGEAYGG GRGYSDHYQL LDSSLSWSNS NRNSNSNLPG 360 QFGLPPSHFN SFVDNFVAGP PLPPPQPQGF TAGYGRGQQY PYIGQYFQAQ GGDNGLVRLD 420 SSATKEARKK RMARQRRFSA HHRHNHSGHH GNHHHHSNSH QNQMNPNATD HCNMATTSQP 480 NAGNWVYWPS STDVVPADSP VHIVNRSNSS LQNQPYPPRI QSDRRQGWKP EKNLRFLLQK 540 VLKQSDVGNL GRIVLPKKEA ESHLPELEAR DGISLAMEDI GTSRVWNMRY RYWPNNKSRM 600 YLLENTGDFV RANGLQEGDF IVIYSDVKCG KYMIRGVKVR QPGSKPDSKR GGKSQRSHST 660 AGVNANGLSS SPPTPATPRR L

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

MDQTQMWVHD QNQQEQEQQH ENHQIFLSDN DDDALMFYSD FPPLPDFPCM SSSSSSTPAP  60
VKPTVSLSSS SSTSSSSSAT SWAVLKSDAD EIAEEIRIND DNSAAAAAVS SPTAVKTEFN  120
GGDCTDDMMM ETFGYMDLLE DSNEFFDPTC IFQNEQQQRD PIEDLQLESF EEVEMEDLMM  180
MHGGESNDNG GKQNVAAVAA AAAAAAEEED MAKVFLEWLR SNRETVSADD LRNVRIKKAT  240
IESAARRLGG GKEGMKQLLK LVLEWVQTNH LHKRKFKEIN ENEANLIGFQ NPNSSGHPWI  300
QTPPPLPPRP LYSPPILGYV QGGGGEAYGG GRGYSDHYQL LDSSLSWSNS NRNSNSNLPG  360
QFGLPPSHFN SFVDNFVAGP PLPPPQPQGF TAGYGRGQQY PYIGQYFQAQ GGDNGLVRLD  420
SSATKEARKK RMARQRRFSA HHRHNHSGHH GNHHHHSNSH QNQMNPNATD HCNMATTSQP  480
NAGNWVYWPS STDVVPADSP VHIVNRSNSS LQNQPYPPRI QSDRRQGWKP EKNLRFLLQK  540
VLKQSDVGNL GRIVLPKKEA ESHLPELEAR DGISLAMEDI GTSRVWNMRY RYWPNNKSRM  600
YLLENTGDFV RANGLQEGDF IVIYSDVKCG KYMIRGVKVR QPGSKPDSKR GGKSQRSHST  660
AGVNANGLSS SPPTPATPRR L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-94	B3 family protein