PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953868.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 235aa    MW: 26897.6 Da    PI: 7.5459
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953868.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.38.6e-51101371128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF P+deelv++yL kk+++++      + e+d++++ePw+Lp+++k + kewyfFs rd+kyatg+r+nrat +gyWkatgkd++v++ 
  XP_022953868.1  10 LPPGFRFYPSDEELVCHYLYKKITNEEALK-GSLMEIDLHTCEPWHLPEAAKLNGKEWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNP 103
                     79***********************99544.67***************8888899**************************************98 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +ge++g++ktLvfy++rap+g kt W+mhe+r+
  XP_022953868.1 104 kTGEVIGMRKTLVFYRKRAPNGIKTGWIMHEFRI 137
                     78899***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MGLRDVGATL PPGFRFYPSD EELVCHYLYK KITNEEALKG SLMEIDLHTC EPWHLPEAAK  60
LNGKEWYFFS FRDRKYATGQ RANRATLEGY WKATGKDRTV MNPKTGEVIG MRKTLVFYRK  120
RAPNGIKTGW IMHEFRIQTP HMPPKEDWVL CRVFYKSKPD EITTGTTNIN QMFDMAAPVP  180
ISSSSYLASI VQLPSAEDGN GVSWKNINNV DKAAGGFEIE DSIQNGFFPY EYIFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.16e-89NAC family protein