PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953869.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 253aa    MW: 28907.8 Da    PI: 6.3618
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953869.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.91.2e-50101371128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF P+deelv++yL kk+++++     ++ e+d++++ePw+Lp+ +k + +ewyfFs rd+kyatg r+nrat++gyWkatgkd+ v++ 
  XP_022953869.1  10 LPPGFRFYPSDEELVCHYLYKKIANQEALR-GTLVEIDLHTCEPWQLPEVAKLNGNEWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRMVVDP 103
                     79************************9555.78***************8888899**************************************99 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +ge+vg++ktLvfy++rap+g kt W+mhe+r+
  XP_022953869.1 104 tRGEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRI 137
                     89999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MGLRDIGATL PPGFRFYPSD EELVCHYLYK KIANQEALRG TLVEIDLHTC EPWQLPEVAK  60
LNGNEWYFFS FRDRKYATGF RTNRATTAGY WKATGKDRMV VDPTRGEVVG MRKTLVFYRN  120
RAPNGIKTGW IMHEFRIETP HMPPKEDWVL CRVFYKSKPD QDMIEATTYS TSQFPFEAAA  180
GVAAAAPSSY CLLSNHVQFV PGDNSNGLLP WEMSMEEAGL RSYGVGDSNA QEMKYEMIEN  240
TNQNGFPFNY FIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.19e-90NAC family protein