PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953884.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 233aa    MW: 25482.4 Da    PI: 9.8001
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953884.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.13e-2065114255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa a+++a+++++g
  XP_022953884.1  65 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAAIAYDNAALRFKG 114
                     69*******.**********94....45***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MGNKIYVTER AVEVKERKKE RKVDRRHGKR ALPWDAAAEE KETDQPFPLS APLSAPLPNQ  60
ERKIHYRGVR QRPWGKWAAE IRDPKKAARV WLGTFDTAEA AAIAYDNAAL RFKGTKAKLN  120
FPERVQANPA EFGFLPSTGG AAAAPATVAS LSSSSSSSSS SVALLPPLPQ GEAFPGLHQY  180
AQLLSSTDAD FPYYSSTLLN QQPHYPFSSS PSHPHQQDHD HYGKDFGAGG STN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.11e-29ERF family protein