PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022953954.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 498aa MW: 56606.2 Da PI: 4.993

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022953954.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	46.9	6.2e-15	199	251	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r++W+ e ++F +a+++LG +k Pk il+lm+ ++Ltl +v+ HLQkY+ XP_022953954.1 199 KSRVVWNVERRRKFSDALNKLG--DKCRPKLILKLMNEPCLTLRQVANHLQKYKA 251 68*****************5..889************************85 PP
2	Myb_DNA-binding	23.2	1.7e-07	203	250	3	48
SS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 W e ++ da ++lG + ++k+I + m+ +tl q+ +++qky+ XP_022953954.1 203 VWNVERRRKFSDALNKLGDKcRPKLILKLMNePCLTLRQVANHLQKYK 250 677777789*******99********999**********7 PP
3	Response_reg	30.2	2.2e-11	7	70	42	107
HHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHH CS Response_reg 42 kdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeel 107 ++Dl++ ++mp+md + +l + e + + +i++++ + + a++al Ga fl Kp+++++l XP_022953954.1 7 DQFDLVMANVSMPDMDSFSFLHVLLEMN--IVVIFMSSVMNLDVATRALAEGACYFLQKPISKDDL 70 569*******************9966..*******************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MIKERGDQFD LVMANVSMPD MDSFSFLHVL LEMNIVVIFM SSVMNLDVAT RALAEGACYF 60 LQKPISKDDL KYVWQHVYRR NRNISKLTHE ANCVEKAKSG KESVGIQNDD TIVLSQSTDE 120 VSINNNCSIN YQLMSYNEEV QNQPTNASYF EGKRLTDDIE GTSKENRVTY YSTPTNFGDT 180 RIDEDNRRMK EYYISSDNKS RVVWNVERRR KFSDALNKLG DKCRPKLILK LMNEPCLTLR 240 QVANHLQKYK AQVESMKKGR ENKLAPRRET SKFNFSVRTQ LPPPLVPKQP HDEANSSTKG 300 GSTSFIGGER FRLIAPRPVP NPTLPVSANF ANHGLIMLDQ NFRHVDSNYY SVPYIINQTT 360 PEVTSSCVFD GTQFSDNPLD VVQQDLTAFK IGNQEAMECN GTSEGIQLMS NNMAFPYSTN 420 LDNIAANFGN EGSQQQSAEY DYLLNFLEDD PHDFDSDLNL SDVDKYSEWL KNTVLENRSG 480 PDSFLGDNTE NFPMGNNP

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MIKERGDQFD LVMANVSMPD MDSFSFLHVL LEMNIVVIFM SSVMNLDVAT RALAEGACYF  60
LQKPISKDDL KYVWQHVYRR NRNISKLTHE ANCVEKAKSG KESVGIQNDD TIVLSQSTDE  120
VSINNNCSIN YQLMSYNEEV QNQPTNASYF EGKRLTDDIE GTSKENRVTY YSTPTNFGDT  180
RIDEDNRRMK EYYISSDNKS RVVWNVERRR KFSDALNKLG DKCRPKLILK LMNEPCLTLR  240
QVANHLQKYK AQVESMKKGR ENKLAPRRET SKFNFSVRTQ LPPPLVPKQP HDEANSSTKG  300
GSTSFIGGER FRLIAPRPVP NPTLPVSANF ANHGLIMLDQ NFRHVDSNYY SVPYIINQTT  360
PEVTSSCVFD GTQFSDNPLD VVQQDLTAFK IGNQEAMECN GTSEGIQLMS NNMAFPYSTN  420
LDNIAANFGN EGSQQQSAEY DYLLNFLEDD PHDFDSDLNL SDVDKYSEWL KNTVLENRSG  480
PDSFLGDNTE NFPMGNNP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	212	ERRRKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	6e-31	ARR-B family protein