PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953971.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ARR-B
Protein Properties Length: 282aa    MW: 32181 Da    PI: 10.0271
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953971.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like43.19.2e-14196245455
         G2-like   4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     ++W+ e   +F +a+++LG  +k  Pk il+lm+ ++Ltl +v+ HLQkY+ 
  XP_022953971.1 196 IVWNVERRLKFFDALNKLG--DKCRPKLILKLMNEPCLTLRQVANHLQKYKA 245
                     579999999*********5..889**************************85 PP
2Myb_DNA-binding24.37.2e-08201244748
                      HHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   7 eEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 
                      e  +++ da ++lG + ++k+I + m+   +tl q+ +++qky+
   XP_022953971.1 201 ERRLKFFDALNKLGDKcRPKLILKLMNePCLTLRQVANHLQKYK 244
                      55679*********99************999************7 PP
3Response_reg23.52.7e-0935850107
                     ESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHH CS
    Response_reg  50 DiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeel 107
                      ++mp+md + +l  + e +  + +i++++  + + a++al  Ga  fl Kp+++++l
  XP_022953971.1   3 NVSMPDMDSFSFLHVLLEMN--IAVIFMSSAMNLKVATKALAEGACYFLQKPISKDDL 58 
                     589*************9966..*********************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MANVSMPDMD SFSFLHVLLE MNIAVIFMSS AMNLKVATKA LAEGACYFLQ KPISKDDLKY  60
VWQHMYRRSI NIAKLTHIAN CVEKAKSGKE SVGIQNDNTV VLSRFTNAAS YNNNCSINYQ  120
LMSYNGKVQN TPTNSHDSIV VSYFGGNRST DDIEGTNKEE RVTCYSKPTN FGHTRAHEDN  180
GRGKEYFISR NTISCIVWNV ERRLKFFDAL NKLGDKCRPK LILKLMNEPC LTLRQVANHL  240
QKYKAQVESM KRGRKNKLAP WMEASKFNFS VRTQLPPLVQ KQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68210.11e-25ARR-B family protein