PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953992.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 312aa    MW: 35725.1 Da    PI: 5.6698
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953992.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.96.5e-151562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l ++    G g+W+ Iar  g+ R++k+c++rw +yl
   XP_022953992.1 15 KGLWSPEEDEKLMRYMLSNGQGCWTDIARNAGLLRCGKSCRLRWINYL 62
                     678*****************************99************97 PP
2Myb_DNA-binding44.73e-1468111146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E+ l+++++ +lG++ W+ Ia++++ gRt++++k+ w++
   XP_022953992.1  68 RGAFSPQEERLILHLHSLLGNR-WSQIAARLP-GRTDNEIKNLWNS 111
                      89********************.*********.*********9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MRKPDSAAAN IRLKKGLWSP EEDEKLMRYM LSNGQGCWTD IARNAGLLRC GKSCRLRWIN  60
YLRPDLKRGA FSPQEERLIL HLHSLLGNRW SQIAARLPGR TDNEIKNLWN SSLKKRLKNH  120
SNISSPNPSE SSELRSSNSF GELTENIIPT HEHKHNNVMN MFMKSSSFSC STSMSTPSMF  180
LQNYIPCDPF PTLLDNDGYN MVGGAMEEGY YGDYSRTIFE PRGLVRDNYD FSHLPPLANG  240
DIIEEIKVPS INIKENNQNN IEELNNDCFD YNNEMSFKAE GIFGNNYQTE LQENSKIGGW  300
DLDGFILDFQ MD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08500.14e-71MYB family protein