PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022954149.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 256aa MW: 29104.8 Da PI: 9.7839

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022954149.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166	1.3e-51	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtd+elv +yL++kv++ +l++ ++i++v+++k++PwdLp + e+e yfFs+r+ ky++g+r+nrat+sgyWkatg dk++l++ XP_022954149.1 14 LPPGFRFHPTDQELVLQYLNRKVHSCPLPA-SIIPDVEVCKADPWDLPGN---MEQERYFFSTREAKYPNGNRSNRATASGYWKATGIDKQILTS 104 79**************************.89***********54...46799******************************998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLvfy+g+ p+g++tdW+mheyrl XP_022954149.1 105 nGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRL 138 56778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MEKLNFLKNG VLRLPPGFRF HPTDQELVLQ YLNRKVHSCP LPASIIPDVE VCKADPWDLP 60 GNMEQERYFF STREAKYPNG NRSNRATASG YWKATGIDKQ ILTSNGNQVV GMKKTLVFYR 120 GKPPHGSRTD WIMHEYRLAS PPTVCFNASQ EKTPFQRSGV GPMENWVLCR IFLKKRNGHQ 180 SEEEKNRKAR LGKPVFYDFM RKERGETDLN LAPSSSSSGS SGITEISNKE LDDHEESSSS 240 SSSSSCNSFP YFRRKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-102	NAC family protein