PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022954268.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 294aa    MW: 32802.4 Da    PI: 7.1798
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022954268.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.72.9e-17222258135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp++Rrgpdg++tLCnaCGl+++ kg+
  XP_022954268.1 222 CRHCGISEksTPMMRRGPDGPRTLCNACGLMWANKGT 258
                     *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MDGIHASDGR MHMNHAQHSM HTQSVQEQEH HDFHYTSNGN ALADEHENEG HGIMVVEREA  60
PSDHGDLAEN RGVMVDRGGD NCDQLTLSYQ GQVYVFDTVS PEKVQAVLLL LGGREVPIRV  120
PSIPITNQQN DRALANIPPR LSVPQRLASL IRFREKRKER NFDKKIRYTV RKEVALRMQR  180
NKGQFTSSKP THEDSSLAIT SWESNENWAT DGNGSQQQEI LCRHCGISEK STPMMRRGPD  240
GPRTLCNACG LMWANKGTLR DLSKAPNQGG QASSFSRNEN VVQNGDSESN PKGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-122GATA family protein