PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022954362.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1375aa MW: 151280 Da PI: 8.1162

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022954362.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.5	1.5e-08	975	1015	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E l+++av+ +G++ ++ I+ ++g ++ qck ++ XP_022954362.1 975 YWTDGEKSLFIEAVTVYGKN-FSMISTHVG-SKSMDQCKVFFS 1015 5***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1375 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG 60 GWHVFSDDYG HGYGPSMSFN NKILENVNSR PSISHGHGKY ARNSRESRSF SQRDWKSHSW 120 ATSNGSTNNG GRLQHDLNYD QRSVHDMLIY PSHSHSDFVN PRDKVKGQHD KIDDFNGLGT 180 NQRRDRDYSL SSSGWKPLKW TRSGGLSSRT STSGHSSSTK GIDALDSNET KSETVLQSVS 240 QNLSPSADHA ECARSSLPCD EANAKKKPRL GWGEGLAKYE KKKVEIPDGT VFTIVNAEAT 300 QSLNSSLIDK GPRGGSGFFD CTSPATPSSV ICGSSPGGDE KSSGKASSDN DVNNFGSPGS 360 GFQNQYEGSP ASNLEKLDRF SIPNLGSPLS QLLQSTDSTS VDSRVVSFTA LSKLLAYKKE 420 ISKVLEMTET EIDLLENELK GLRPGSKGYF SSFPLASSSL PVGHKCFEEH NNVTDTIPPV 480 ATLPVVTSTN NNSITMPHST SDSEEVHADV KENDQSDAKE SVIMKEKLTL TGCSVEDNVV 540 ASVDNNMLMK SEGLALEPIS SDIYEYADEG GDNVFDLILA SNKKSAREAS EALIRLLPAN 600 ERKIDIWSTN ACSQNQCALK ERFAKRKKLI RFKERVIALK FRAYQSLWKE SLHVPPVRNL 660 RTKSQKKYQL SLWTNYSAYQ KNRSSIRFRM PSPAGNLNPV SNTEILKHVS KQLSNPQTKQ 720 YRKTLKMPTL ILDKKDKMAS RFISNNGLVE DPCAVEKERM MINPWTSEEK DVFMEKLEYF 780 GKDFGKIASF LDHKTTADCI EFYYKNHKSD CFEKTKKLEF GKKAKSSTSN YLMTTGKKWN 840 PETNAASLDI LGTASAMTAC AHKYSSSRSG GRTACYTTQF DDNLSERAKS FHSFGNEREK 900 VAADVLAGIC GSLSSEAMGS SCITGNFHRR DGSQDLKCKK GATTILRRRM TANLLQSVDD 960 EVCSDESCGE MDPSYWTDGE KSLFIEAVTV YGKNFSMIST HVGSKSMDQC KVFFSKARKC 1020 LGLDLICSAK KMPANGRDCN ANGFPCEAGV DRNAFPCDEG VGNGGELESM NPQSTHQEVK 1080 EINNHSNTAV DAMVSDACHR KDSSHSALDE DCQSVNSAND KNRSLHNHAV VSDETAKEQG 1140 NSSRVTVSVG NGLDAETKRG NIGQGAKAPA HTADSSSAPL NSHVTSVPKD EQGRLHVRVR 1200 SRSLSDSEQL SINGDVKLFG QILTHSSSVP SSSSNGNRTQ RKFKRRLKAS SHGNLSTAKF 1260 SRKSSSGQED VPSRSYGIWD GTQMRNGLSS LPDPTTLLSR YPTFDNSSKS TSPIEQQQPL 1320 LNEQKSNCDS QMSEVNSSKV AQEVVGGIIV GEICNDDDDA LDTKLHRNKA EDGGS

Sequence ? help Back to Top

Protein Sequence Length: 1375 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG  60
GWHVFSDDYG HGYGPSMSFN NKILENVNSR PSISHGHGKY ARNSRESRSF SQRDWKSHSW  120
ATSNGSTNNG GRLQHDLNYD QRSVHDMLIY PSHSHSDFVN PRDKVKGQHD KIDDFNGLGT  180
NQRRDRDYSL SSSGWKPLKW TRSGGLSSRT STSGHSSSTK GIDALDSNET KSETVLQSVS  240
QNLSPSADHA ECARSSLPCD EANAKKKPRL GWGEGLAKYE KKKVEIPDGT VFTIVNAEAT  300
QSLNSSLIDK GPRGGSGFFD CTSPATPSSV ICGSSPGGDE KSSGKASSDN DVNNFGSPGS  360
GFQNQYEGSP ASNLEKLDRF SIPNLGSPLS QLLQSTDSTS VDSRVVSFTA LSKLLAYKKE  420
ISKVLEMTET EIDLLENELK GLRPGSKGYF SSFPLASSSL PVGHKCFEEH NNVTDTIPPV  480
ATLPVVTSTN NNSITMPHST SDSEEVHADV KENDQSDAKE SVIMKEKLTL TGCSVEDNVV  540
ASVDNNMLMK SEGLALEPIS SDIYEYADEG GDNVFDLILA SNKKSAREAS EALIRLLPAN  600
ERKIDIWSTN ACSQNQCALK ERFAKRKKLI RFKERVIALK FRAYQSLWKE SLHVPPVRNL  660
RTKSQKKYQL SLWTNYSAYQ KNRSSIRFRM PSPAGNLNPV SNTEILKHVS KQLSNPQTKQ  720
YRKTLKMPTL ILDKKDKMAS RFISNNGLVE DPCAVEKERM MINPWTSEEK DVFMEKLEYF  780
GKDFGKIASF LDHKTTADCI EFYYKNHKSD CFEKTKKLEF GKKAKSSTSN YLMTTGKKWN  840
PETNAASLDI LGTASAMTAC AHKYSSSRSG GRTACYTTQF DDNLSERAKS FHSFGNEREK  900
VAADVLAGIC GSLSSEAMGS SCITGNFHRR DGSQDLKCKK GATTILRRRM TANLLQSVDD  960
EVCSDESCGE MDPSYWTDGE KSLFIEAVTV YGKNFSMIST HVGSKSMDQC KVFFSKARKC  1020
LGLDLICSAK KMPANGRDCN ANGFPCEAGV DRNAFPCDEG VGNGGELESM NPQSTHQEVK  1080
EINNHSNTAV DAMVSDACHR KDSSHSALDE DCQSVNSAND KNRSLHNHAV VSDETAKEQG  1140
NSSRVTVSVG NGLDAETKRG NIGQGAKAPA HTADSSSAPL NSHVTSVPKD EQGRLHVRVR  1200
SRSLSDSEQL SINGDVKLFG QILTHSSSVP SSSSNGNRTQ RKFKRRLKAS SHGNLSTAKF  1260
SRKSSSGQED VPSRSYGIWD GTQMRNGLSS LPDPTTLLSR YPTFDNSSKS TSPIEQQQPL  1320
LNEQKSNCDS QMSEVNSSKV AQEVVGGIIV GEICNDDDDA LDTKLHRNKA EDGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-133	MYB family protein