PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022954371.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family TCP
Protein Properties Length: 343aa    MW: 37043.9 Da    PI: 8.3021
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022954371.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP119.73.6e-37114195283
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssas 83 
                     a+k+++++++h kv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++++as+  a+  s s+ 
  XP_022954371.1 114 APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSLSDP 195
                     789******************************************************************8774444444444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MEEDPSFLFF SFLFFFSSSF ISLSLSLSLS LSLLPKSDPL INPISPHRGT HLCWVLHPSP  60
HPLADMAEHN NKKPSPAAAA PPPPSSPAPT PPSSDIIIAN PNKDQNKKHQ QQLAPKRTSN  120
KDRHKKVDGR GRRIRMPALC AARVFQLTRE LGHKTDGETI QWLLQQAEPS IIAATGSGTI  180
PASALHAAGV SLSDPDTSVS VSATLTPKID AVPRLNWAMM GANLNRSHMG TPGFWPSLGG  240
IGPGFVSENP GSIMPKFGFH GFEFQGMNLG SVNFPTIIGN QQPQQQIPGL ELGLSQEGNN  300
VRGMLNPPSY SQIYHQIGQS RDPSAAPLEQ DQAPDKDNSQ ESR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27010.11e-53TCP family protein