PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022954533.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 449aa MW: 48593.6 Da PI: 7.0368

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022954533.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.2	1e-36	94	246	2	134
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssasec.eaesss 79 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LGf ++sk++eWL+++a ai el+++ +++s+ e+ +++ + XP_022954533.1 94 SGGKDRHSKVWTSKGLRDRRVRLSVPTAIQFYDLQDRLGFEQPSKAVEWLIEAAADAIAELPSLhgafsdekmgsdgtdqGFDSP-EMeLDGDTK 187 689***********************************************************999999999888665544444.234566666 PP TCP 80 ssasnsssgkaaksaakskksqksaasalnlak....esrakarararertrekmrikn 134 + ++n++ + + +a+s+ s++s+ s l+l++ rakar rarert++++ +++ XP_022954533.1 188 KHQQNQRRMLSLARSACSSTSETSKGSGLSLSRseilVNRAKARDRARERTAKEKEKEQ 246 6666666666666666777777777777777775455778*******9988877664 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MEVVEIQEQP CRFSRIGNRG NESNKLGQKG IVHSPDDEEI KEFSARVAVV ASASVSATAG 60 GVEPGGCGGN GGGGVNRLRG WHHSSRIIRV ARASGGKDRH SKVWTSKGLR DRRVRLSVPT 120 AIQFYDLQDR LGFEQPSKAV EWLIEAAADA IAELPSLHGA FSDEKMGSDG TDQGFDSPEM 180 ELDGDTKKHQ QNQRRMLSLA RSACSSTSET SKGSGLSLSR SEILVNRAKA RDRARERTAK 240 EKEKEQESIP NNQSFTELLT GGGATTNRTS SAPENTAVEP NLFDKATAMD YFTSSGIIGQ 300 EPSSSSSSRP GHNQSAGFSG QIFLGNPHQL PMSVPQFNVS AGENTQQDRL QHFSFVPDNL 360 NDYNLNFTIS AGLAGCNRGT LQSNISPSLL PYLQRFPHDG SNLPFFIGAP SPATTPVQLE 420 NHQHLFDGSW QLCYADGTHH SDQKGKGKN

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MEVVEIQEQP CRFSRIGNRG NESNKLGQKG IVHSPDDEEI KEFSARVAVV ASASVSATAG  60
GVEPGGCGGN GGGGVNRLRG WHHSSRIIRV ARASGGKDRH SKVWTSKGLR DRRVRLSVPT  120
AIQFYDLQDR LGFEQPSKAV EWLIEAAADA IAELPSLHGA FSDEKMGSDG TDQGFDSPEM  180
ELDGDTKKHQ QNQRRMLSLA RSACSSTSET SKGSGLSLSR SEILVNRAKA RDRARERTAK  240
EKEKEQESIP NNQSFTELLT GGGATTNRTS SAPENTAVEP NLFDKATAMD YFTSSGIIGQ  300
EPSSSSSSRP GHNQSAGFSG QIFLGNPHQL PMSVPQFNVS AGENTQQDRL QHFSFVPDNL  360
NDYNLNFTIS AGLAGCNRGT LQSNISPSLL PYLQRFPHDG SNLPFFIGAP SPATTPVQLE  420
NHQHLFDGSW QLCYADGTHH SDQKGKGKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	3e-52	TCP family protein