PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022954639.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 163aa    MW: 18400.3 Da    PI: 10.5199
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022954639.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.4e-121158555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    +   E+ RR+r+N++f eL ++l +    +s+K +K+ iL  Av+ I +L+
  XP_022954639.1 11 KAHKEKVRRNRLNDRFLELNSILNHG---TSPKIDKSVILGDAVRMILQLR 58
                    5678*********************9...9*******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MSPGSSASLS KAHKEKVRRN RLNDRFLELN SILNHGTSPK IDKSVILGDA VRMILQLRDE  60
AQKLKESNEN FLEKINEMKA EKNELRDEKQ RLKEAKDNLK QKMKTFITQP SFLPHPPPFS  120
APNHVVGAKF VPVIGYPGVS MWKLMPPGAI DTSQDHVLRP PVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.13e-65bHLH family protein