PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022954650.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SBP
Protein Properties Length: 162aa    MW: 17726.4 Da    PI: 6.6206
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022954650.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP131.23.7e-4180156278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     Cq+++C+adls  k+yhrrhkvCe+h+kap+v+v+g++qrfCqqCsrfh l efD +krsCr+rLa+hn+rrrk+++
  XP_022954650.1  80 CQADNCNADLSGSKRYHRRHKVCEFHAKAPAVVVAGIHQRFCQQCSRFHGLMEFDLTKRSCRKRLAGHNQRRRKSSS 156
                     **************************************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MVTGKADGKR RLNYYDVEEE DDEEEEEADE EEDGDGELGF GEDFNKKKKI VDGGGSSNKG  60
SGSGYGGAAA TAAVAVAPSC QADNCNADLS GSKRYHRRHK VCEFHAKAPA VVVAGIHQRF  120
CQQCSRFHGL MEFDLTKRSC RKRLAGHNQR RRKSSSDVHG ES
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149154QRRRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.18e-38SBP family protein