PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022954795.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 295aa    MW: 32088 Da    PI: 9.4231
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022954795.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.61.6e-1495139347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_022954795.1  95 PWTEEEHKLFLLGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKY 139
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MTTDVPDSAV SGGVTKEIML FGVRVVVDPM RKSVSMNNLS QYQHPPAVSN DDNGGNSKGN  60
ISAAERKEDS AAGYASADDA VPNSGGNRER KRGVPWTEEE HKLFLLGLHK VGKGDWRGIS  120
RNFVKTRTPT QVASHAQKYF LRRSNLNRRR RRSSLFDITT DTVKVAAEEH QIQLQDNSSK  180
LQSLLPPPPP ETCNINEYHH PMPTFPLSVC PAVLPVPNPI ENLTLGHENL DLTAEILPLN  240
PTTPKINSNS KSALKSGALS LNLSLPSNSA NSSSKHPDFP GITRMSSGDN IISVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.21e-52MYB_related family protein