PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022954897.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 370aa MW: 39574.3 Da PI: 8.5664

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022954897.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	139.2	1.1e-43	92	167	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dls+ak y++rhkvC++hsk+p+v+v+g+eqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ XP_022954897.1 92 RCQVEGCKVDLSDAKAYYSRHKVCTMHSKSPKVIVAGIEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 167 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MRFRGFFFIV LMEMDCSSLT ESGGSTTSSP PISSAESLNG LKFGHKIYFE DVGIGELPKS 60 GGGSFSSSPV IASTPTKKPR GGGVVQAAQP PRCQVEGCKV DLSDAKAYYS RHKVCTMHSK 120 SPKVIVAGIE QRFCQQCSRF HQLPEFDQGK RSCRRRLAGH NERRRKPPPG SLLSTRYGRF 180 SSSIFENSSR VGSFLMDFSA YPKLTGKASE RVPGSQNITA MGSYIPYPWQ SNSENSPPEL 240 FLPVSAGPGN EVTDSSCALS LLSNQTSALE VNALLNAEGA LVSQTASAHA AAAAAAAADH 300 FSTVSWGFKG NEAAASSSSS LDLPSDLGLN HPGLTSDVQF VSHQGRRPYM ELGHSGAFDS 360 ATQHQLHWSL

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MRFRGFFFIV LMEMDCSSLT ESGGSTTSSP PISSAESLNG LKFGHKIYFE DVGIGELPKS  60
GGGSFSSSPV IASTPTKKPR GGGVVQAAQP PRCQVEGCKV DLSDAKAYYS RHKVCTMHSK  120
SPKVIVAGIE QRFCQQCSRF HQLPEFDQGK RSCRRRLAGH NERRRKPPPG SLLSTRYGRF  180
SSSIFENSSR VGSFLMDFSA YPKLTGKASE RVPGSQNITA MGSYIPYPWQ SNSENSPPEL  240
FLPVSAGPGN EVTDSSCALS LLSNQTSALE VNALLNAEGA LVSQTASAHA AAAAAAAADH  300
FSTVSWGFKG NEAAASSSSS LDLPSDLGLN HPGLTSDVQF VSHQGRRPYM ELGHSGAFDS  360
ATQHQLHWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57920.1	9e-54	SBP family protein