PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022954900.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 274aa    MW: 29667.7 Da    PI: 5.1986
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022954900.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.92.4e-2972129359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+ver++ dp++++i Y+ eHnh+
  XP_022954900.1  72 DSWAWRKYGQKPIKGSPYPRAYYRCSSSkGCPARKQVERNRLDPTMLVISYSCEHNHS 129
                     99************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MDATFNNNRH QFYSGDPLDD SDEKGPDSPP STSAAAAAAK KGRRGMKKKV VSVRINGDTP  60
RNSSGSTTPP PDSWAWRKYG QKPIKGSPYP RAYYRCSSSK GCPARKQVER NRLDPTMLVI  120
SYSCEHNHSG PVSRNINNHH QAAAVEKPGS PESVPVHPEP EPEVEEKFVD MGEESLITGD  180
EFSWFGEMET TSSTVLENSI FSGCSSGLGD SISSDVAMLF PMGDNDVDDS LFADLGELPE  240
CSLVFRHGGA RGLAADEQPA AGQRRITPWC GTTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.11e-63WRKY family protein