PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022955025.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 282aa    MW: 31333.1 Da    PI: 7.4783
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022955025.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1081.1e-33411821128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.... 79 
                     lp+G++F+Ptd+e++ e+L++k++ ++       +   +    +++   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++    
  XP_022955025.1  41 LPAGVKFDPTDQEIL-EHLQAKAAVSDahklhplI---DefipTLEGEnGICYTHPQKLP-GVSKDGQIRHFFHRPSKAYTTGTRKRRKVHtdee 130
                     799***********9.9999998888755554332...132222433336**********.555666777******************7443455 PP

             NAM  80 ..sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                       + +W++tgk+++v++ +g ++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  XP_022955025.1 131 gnETRWHKTGKTRPVVV-GGVVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 182
                     55788************.**************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MTWCSGSDDD ESSTAPALRC PSCGLHIELQ DQAGIHDLPG LPAGVKFDPT DQEILEHLQA  60
KAAVSDAHKL HPLIDEFIPT LEGENGICYT HPQKLPGVSK DGQIRHFFHR PSKAYTTGTR  120
KRRKVHTDEE GNETRWHKTG KTRPVVVGGV VKGFKKILVL YTNYGRQRKP EKTNWVMHQY  180
HLGTNEEEKD GELVVSKVFY QTQPRQCNSS ATAAAAAAAA ANHHSDSTAH VDYYNASNFI  240
SFDHNSDNPP QLLPNLVLSG EASSFLRFPP ADTTKRKLDM KL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28470.11e-101NAC family protein