PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022955057.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 267aa    MW: 30203.1 Da    PI: 5.9106
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022955057.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix476.7e-1520110186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +Wt++ + +Li+a  ++  +l+rg+l++++W +v++ +       ++  rs +qCk++++ ++k+yk ++++ ++ +   +s++p++ +l+
  XP_022955057.1  20 CWTEDATSTLIDAWGRRFLDLNRGNLRQKDWLDVADSVnalhgLTKKTYRSDVQCKNRIDTVKKKYKTEAARVSSSRGSFVSSWPFYGRLH 110
                     8*************************************99999899999***********************9999999999*****9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MADLTPSSSI SRQVPIREDC WTEDATSTLI DAWGRRFLDL NRGNLRQKDW LDVADSVNAL  60
HGLTKKTYRS DVQCKNRIDT VKKKYKTEAA RVSSSRGSFV SSWPFYGRLH ELIGPSAFPR  120
SFRKMPPPAS AAAAAEAVIA VSRKRPAAAM DVGVFRRNYS AMAAAAAAAA LTEDEDEEEE  180
RVSEEEEEEE EEAEGEGMSR LARAIQRFGE VYESVEAEKV RQMVELEKQR MQFAKDLEVQ  240
RMHMFMETQV QLEKIKRGKK KSTPSDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.15e-47Trihelix family protein