PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022955061.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 389aa MW: 43381.8 Da PI: 6.5565

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022955061.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.1	5.9e-31	190	248	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ XP_022955061.1 190 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 248 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MFCNLFEMDN DNYQQAGDLT DVIRASSAAT SAAHSSEFSL GDRHLLPHLP ADDSSMNFGD 60 PLLLPTSSTR DPFLHPHFSS FNFDSHGGGW GFTAAERPST VFPRMLQISP TSKVGDGVIT 120 TPPCDSPAVA VTGNSPTSNP LCLRDNSDLQ ISPPRNPALK RRKNQVKKVV CIPAPAPANS 180 RSSSGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CSARKQVERS RTDPNMLVIT 240 YTSEHNHPWP TQRNALAGST RSHPSRTSTS TTRITSPKHE HNNENLATVT IKEEDMNEDQ 300 TTEKATTTIT TNQHQVEGDH QEFLYDLIFD EFADQMNEHD RHHATDTMND NLLRFSNHGF 360 SKGNDEERSK DPFLELYDWT EKSNGSLFK

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MFCNLFEMDN DNYQQAGDLT DVIRASSAAT SAAHSSEFSL GDRHLLPHLP ADDSSMNFGD  60
PLLLPTSSTR DPFLHPHFSS FNFDSHGGGW GFTAAERPST VFPRMLQISP TSKVGDGVIT  120
TPPCDSPAVA VTGNSPTSNP LCLRDNSDLQ ISPPRNPALK RRKNQVKKVV CIPAPAPANS  180
RSSSGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CSARKQVERS RTDPNMLVIT  240
YTSEHNHPWP TQRNALAGST RSHPSRTSTS TTRITSPKHE HNNENLATVT IKEEDMNEDQ  300
TTEKATTTIT TNQHQVEGDH QEFLYDLIFD EFADQMNEHD RHHATDTMND NLLRFSNHGF  360
SKGNDEERSK DPFLELYDWT EKSNGSLFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	1e-65	WRKY family protein