PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022955064.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 277aa    MW: 30841.8 Da    PI: 4.3999
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022955064.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH223e-07159201855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     + r RR++i  + +eL el+P        K++ ae+L  A +Y+k Lq
  XP_022955064.1 159 AARERRRKITAKTQELGELIPGG-----VKMNTAEMLNSAFKYVKFLQ 201
                     6799*****************96.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MAALTFFSNF YSDPSSINPQ FPYFSPEMSP DLFFLPPPHL DYVPAMPDDS VFIPTVAPFF  60
DDASPFLFSD VYPYFSAGFF PFDEFEFHYS KRQRIVLEQS FCYGGVGGNV GGGGGGGGYF  120
PSGLLDGRVD NVEMMNNGNC SKTKQLVSPS NTLSVQTIAA RERRRKITAK TQELGELIPG  180
GVKMNTAEML NSAFKYVKFL QAQVAILQLK QETEHELEEQ ETEDLQILES AMIQEKLYSE  240
EQCLVPKGFV QNLANFPEIQ SHPSISNSIN QILKTSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.15e-25bHLH family protein