PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022955188.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 210aa    MW: 24192 Da    PI: 8.943
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022955188.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.5e-103886655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    + +Er+RR++++  f++L +l+P++ +      +  + Le A++YIk+L+
  XP_022955188.1 38 KLIERNRRAEMKALFSRLHSLVPNQ-SSMEAETTLLDQLENATNYIKQLK 86
                    689*********************6.367888****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MLLLQPPFLL VHELKVFELP KMANNFIHSP SSAKIDRKLI ERNRRAEMKA LFSRLHSLVP  60
NQSSMEAETT LLDQLENATN YIKQLKENVE KLKEKKEKLM KLGEESARSS EIKARLLVQV  120
EAHQVGSSLE FLLTTRSDYH LVLKQVLQLL QENGTQIVYI NHSTVKDRVF HKIIAEMVGE  180
GTTSESIEGE RICETVKKFV SQYKDVQYNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.17e-11bHLH family protein