PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022955225.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 195aa    MW: 22464.8 Da    PI: 10.5491
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022955225.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF84.56.4e-27959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien + rqv+fskRrng+lKKA+EL vLCdaevav+ifs++gk y +ss
  XP_022955225.1  9 KRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSS 59
                    79***********************************************96 PP
2K-box67.83.7e-23871691698
           K-box  16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                      ++ e++ +++ i++L+  +Rh+ GedLe+L++keL++Le+qL  +++++Rsk  +++ e++++l+kk k lqee+ +L+k+l
  XP_022955225.1  87 VWKSEMEDMNRTISSLEARLRHFSGEDLEPLTIKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRL 169
                     699*****************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MGRGKVEVKR IENPTSRQVS FSKRRNGVLK KAYELAVLCD AEVAVVIFSP SGKAYQFSSH  60
DIDGTLVRYR KYVGQSQFNH PLSRALVWKS EMEDMNRTIS SLEARLRHFS GEDLEPLTIK  120
ELKRLERQLS VGIERVRSKM RRIISEHTSQ LKKKYKGLQE EHSRLQKRLN QLKDVADTTT  180
RVSDADGVSV LEMFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26310.14e-44MIKC_MADS family protein