PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022955285.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 261aa MW: 29238.9 Da PI: 9.3207

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022955285.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	96.7	9.7e-31	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gkl+e+s XP_022955285.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLFEFS 58 79***********************************************8 PP
2	K-box	90.2	3.9e-30	93	174	19	100
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ +Lk+ +e +q++qR+llGedL++L+ keL+qLe+qLe+sl++iRs+K++ l+eq+ elq+ke++l e+n++Lrkklee XP_022955285.1 93 DDYLNLKATVELMQQSQRNLLGEDLGPLNAKELEQLEHQLETSLERIRSTKTRTLMEQLAELQRKEHMLVEDNRSLRKKLEE 174 6899***************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLFEFSGG 60 SSMTRTLEKY RRCSYDIRDG ARHLNNNGPQ SFDDYLNLKA TVELMQQSQR NLLGEDLGPL 120 NAKELEQLEH QLETSLERIR STKTRTLMEQ LAELQRKEHM LVEDNRSLRK KLEESSAQVA 180 AASAAWGWEG GAGGHSMDYP SRIASQSDAF FYPITQPIPT LQIGYNSVGS VGLSNNNTNN 240 NNSNAGAPPQ NGNGFQLGWM L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	2e-75	MIKC_MADS family protein