PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022955354.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 355aa    MW: 37609.7 Da    PI: 8.8139
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022955354.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.11e-10289334655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri  ++ +L++l+P+     +k  s +++L +Av++Ik Lq
  XP_022955354.1 289 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYSDMLDLAVQHIKGLQ 334
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MRHMYQSNSS SSSSQKFMAS ANAGVGSGGG GGGSGGGLTR YGSAPGSLLT SAVDSVIGSR  60
HPDSVSSLRT PPSFSGHYFS SADSSLKTSS STAAAARSYG IHDLALGDFS TARNFNSNGG  120
QSSCSSPLVR QKSSPAGFLG HLSVAERNER EVEKTGGGFS LTMGGGGNGI GRLKSQVRMN  180
GQDSLSQISE MNESFMEAAN SSANGLTPST FGMDSSWDTS NNSIVFGAPH AKTSRHHPDA  240
EFFTTLESQF SMPQTTLEMA TVERLLHIPE HSAPCKIRAK RGCATHPRSI AERERRTRIS  300
GKLKKLQDLV PNMDKQTSYS DMLDLAVQHI KGLQHQIQML NKEAESCTCG NKECL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.11e-66bHLH family protein