PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022955360.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 344aa MW: 37827.1 Da PI: 6.0917

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022955360.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.3	3.6e-05	36	54	2	20
HHHHHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsaf 20 r +h+e E+rRR++iN+++ XP_022955360.1 36 RSKHSETEQRRRSKINERI 54 899**************98 PP
2	HLH	26.2	1.5e-08	71	103	19	55
HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +f+ Lr+l+P++ ++K +Ka+ L +++eYI+ Lq XP_022955360.1 71 RFQILRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 103 79*******9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MVKSSKSVHE RFQDDGNELG VKIEGKSGES KASGHRSKHS ETEQRRRSKI NERIFVTISC 60 FCEILCSDGG RFQILRDLIP QNDQKRDKAS FLLEVIEYIQ FLQEKLNMYE GSCQGWSSEP 120 SKLVPWKNYR AAESYVDHSQ VVKRGPNHES AVVFSQAMLT NAPNVMDADM GPAAVLNAVD 180 HTLVSATQGL PMSMHAQPIV FEPVGRGSLS TESLDEPASG SENISSKTQT ELLQGRTHAT 240 TGFLNHAVSD QEDLSVESEM EGISGVYSHG LLSTLTQALQ ASGVDLSQTN ISVKVDVGRR 300 ANRSLSLSED DKKQSLNNQV TAQSLHGYFS EDSEQAHKKL RTGV

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MVKSSKSVHE RFQDDGNELG VKIEGKSGES KASGHRSKHS ETEQRRRSKI NERIFVTISC  60
FCEILCSDGG RFQILRDLIP QNDQKRDKAS FLLEVIEYIQ FLQEKLNMYE GSCQGWSSEP  120
SKLVPWKNYR AAESYVDHSQ VVKRGPNHES AVVFSQAMLT NAPNVMDADM GPAAVLNAVD  180
HTLVSATQGL PMSMHAQPIV FEPVGRGSLS TESLDEPASG SENISSKTQT ELLQGRTHAT  240
TGFLNHAVSD QEDLSVESEM EGISGVYSHG LLSTLTQALQ ASGVDLSQTN ISVKVDVGRR  300
ANRSLSLSED DKKQSLNNQV TAQSLHGYFS EDSEQAHKKL RTGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	8e-51	bHLH family protein