PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022955434.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CPP

Protein Properties

Length: 748aa MW: 81439.3 Da PI: 5.181

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022955434.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51.5	2e-16	462	500	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C+dC+Nk XP_022955434.1 462 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKP 500 589**********************************96 PP
2	TCR	50.6	3.7e-16	547	585	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+Clk+YCeC++ g+ Cs +C+Ce+CkN XP_022955434.1 547 RHKRGCNCKKSNCLKRYCECYQGGVGCSISCRCEGCKNA 585 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 748 aa Download sequence
MDTPERNQIG TTAAPKFEDS PVFNYINNLS PIQPVKSIHT AQTFNSLSFS SLPSVFTSPH 60 TSSYKESRFL RRRCYSDLSK PDFSSENGNK GVTGNVDELQ VNSSAPDDKS ESSTKLSSEP 120 QALKSHSSRP DCDRPLPDSD DRAVSDPCVE NNSGSGSSEA EGNRLVVSQT EEKEGTSYDW 180 ESLITEGADI LIFSSPNGSE AIRLVQKPSS TLAQMMENDD ANLSRMRIAD PIESSGGQHE 240 IEFSSSRAGE GCELKDMDQA IDDGISFPIS SDSMSREITD EEVARYIADD CMPVSNLHRG 300 MRRRCLDFEA VVSRRKNMED GSNGCSVSTH PEEKTTSMDK QLVPYKSGGV VTRYVLTGIG 360 LHLNALATTS KDAKNLNHER FSSERQLNLP NSGGSCHSSS TGLDPLSTSI VTEQDMDPSG 420 SGVQSEEDAA MASAYVLADD FNQNSPKRKR RRLEHAGETE LSCKRCNCKK SKCLKLYCEC 480 FAAGVYCIEP CSCQDCFNKP IHEDTVLATR KQIESRNPLA FAPKVIRNSD SLPEPGDESN 540 KTPASARHKR GCNCKKSNCL KRYCECYQGG VGCSISCRCE GCKNAFGRKD GSSLLGLETE 600 LEEEETEANQ MSVMDKALQG PEIQNNEEQN PGSAIPSTPL QLPRQLVPLP FSARSNPLRS 660 SFLNVGSSSG FYAGYKHEKP NTAPVSDDAI PNILRGDGSP GAGVKTDSPN SMRISPPQSD 720 FGLSPLPRTG RKLILQSIPS FPSLTPQH

Sequence ? help Back to Top

Protein Sequence Length: 748 aa Download sequence

MDTPERNQIG TTAAPKFEDS PVFNYINNLS PIQPVKSIHT AQTFNSLSFS SLPSVFTSPH  60
TSSYKESRFL RRRCYSDLSK PDFSSENGNK GVTGNVDELQ VNSSAPDDKS ESSTKLSSEP  120
QALKSHSSRP DCDRPLPDSD DRAVSDPCVE NNSGSGSSEA EGNRLVVSQT EEKEGTSYDW  180
ESLITEGADI LIFSSPNGSE AIRLVQKPSS TLAQMMENDD ANLSRMRIAD PIESSGGQHE  240
IEFSSSRAGE GCELKDMDQA IDDGISFPIS SDSMSREITD EEVARYIADD CMPVSNLHRG  300
MRRRCLDFEA VVSRRKNMED GSNGCSVSTH PEEKTTSMDK QLVPYKSGGV VTRYVLTGIG  360
LHLNALATTS KDAKNLNHER FSSERQLNLP NSGGSCHSSS TGLDPLSTSI VTEQDMDPSG  420
SGVQSEEDAA MASAYVLADD FNQNSPKRKR RRLEHAGETE LSCKRCNCKK SKCLKLYCEC  480
FAAGVYCIEP CSCQDCFNKP IHEDTVLATR KQIESRNPLA FAPKVIRNSD SLPEPGDESN  540
KTPASARHKR GCNCKKSNCL KRYCECYQGG VGCSISCRCE GCKNAFGRKD GSSLLGLETE  600
LEEEETEANQ MSVMDKALQG PEIQNNEEQN PGSAIPSTPL QLPRQLVPLP FSARSNPLRS  660
SFLNVGSSSG FYAGYKHEKP NTAPVSDDAI PNILRGDGSP GAGVKTDSPN SMRISPPQSD  720
FGLSPLPRTG RKLILQSIPS FPSLTPQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	446	453	PKRKRRRL
2	447	452	KRKRRR
3	448	452	RKRRR
4	449	453	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-123	CPP family protein