PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022955449.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 295aa MW: 32731.4 Da PI: 7.3195

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022955449.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	101.8	1.2e-31	54	179	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............................ss 67 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl+ ak +i+el+ + + XP_022955449.1 54 FGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLpipsaslglhyqsmlpphiahrsefkinsG- 147 689*************************************************************555555555555544444443333322210. PP TCP 68 ssasec.....eaesssssasnsssg............k 89 ++++++++++ s++ + XP_022955449.1 148 -----IdkveiDDDDEQKQHK--SNSnpssfsallnnvS 179 .....0112211111111111..1111233333333330 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MPAGKHDERH TMITNSKEEN SPPKLVASSS SSAALATPWL RLKDPRIVRV SRAFGGKDRH 60 SKVCTIRGLR DRRVRLSVST AIQLYDLQDR LGLNQPSKVV DWLLNVAKDE IDELPPLPIP 120 SASLGLHYQS MLPPHIAHRS EFKINSGIDK VEIDDDDEQK QHKSNSNPSS FSALLNNVSA 180 PPFGFHWDPS SSSSSSSSSS TTNLPFFTSQ AEDLHNFNHV TPLSLSTGSQ FLEFNNHLHQ 240 NFFINNSLNT PPPMHSITHP AVRPFHFSMA TKFVAQHKNN NGDPANKEDG FGSDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	1e-48	TCP family protein