PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022955450.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 293aa MW: 32662.4 Da PI: 7.5888

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022955450.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	101.8	1.1e-31	52	177	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............................ss 67 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl+ ak +i+el+ + + XP_022955450.1 52 FGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLpipsaslglhyqsmlpphiahrsefkinsG- 145 689*************************************************************555555555555544444443333322210. PP TCP 68 ssasec.....eaesssssasnsssg............k 89 ++++++++++ s++ + XP_022955450.1 146 -----IdkveiDDDDEQKQHK--SNSnpssfsallnnvS 177 .....0112211111111111..1111233333333330 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MRKHDERHTM ITNSKEENSP PKLVASSSSS AALATPWLRL KDPRIVRVSR AFGGKDRHSK 60 VCTIRGLRDR RVRLSVSTAI QLYDLQDRLG LNQPSKVVDW LLNVAKDEID ELPPLPIPSA 120 SLGLHYQSML PPHIAHRSEF KINSGIDKVE IDDDDEQKQH KSNSNPSSFS ALLNNVSAPP 180 FGFHWDPSSS SSSSSSSSTT NLPFFTSQAE DLHNFNHVTP LSLSTGSQFL EFNNHLHQNF 240 FINNSLNTPP PMHSITHPAV RPFHFSMATK FVAQHKNNNG DPANKEDGFG SDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	1e-48	TCP family protein