PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022955451.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 270aa MW: 29959.3 Da PI: 7.2559

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022955451.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	102.2	9.1e-32	29	155	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............................ss 67 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl+ ak +i+el+ + + XP_022955451.1 29 FGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLpipsaslglhyqsmlpphiahrsefkinsG- 122 689*************************************************************555555555555554444444333322210. PP TCP 68 ssasec.....eaesssssasnsssg.............k 89 ++++++++++ s++ + XP_022955451.1 123 -----IdkveiDDDDEQKQHK--SNSnpssfsallnnvsA 155 .....0112211111111111..11112333333333430 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MPSSSSSAAL ATPWLRLKDP RIVRVSRAFG GKDRHSKVCT IRGLRDRRVR LSVSTAIQLY 60 DLQDRLGLNQ PSKVVDWLLN VAKDEIDELP PLPIPSASLG LHYQSMLPPH IAHRSEFKIN 120 SGIDKVEIDD DDEQKQHKSN SNPSSFSALL NNVSAPPFGF HWDPSSSSSS SSSSSTTNLP 180 FFTSQAEDLH NFNHVTPLSL STGSQFLEFN NHLHQNFFIN NSLNTPPPMH SITHPAVRPF 240 HFSMATKFVA QHKNNNGDPA NKEDGFGSDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	7e-49	TCP family protein