PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022955592.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 957aa MW: 106842 Da PI: 7.0144

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022955592.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176	4.9e-55	20	135	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl++ ei++iL n++k++l+ +++ +p+ gsl+L++rk +ryfrkDG++w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n +fqr XP_022955592.1 20 QEaQNRWLRPAEICEILRNYQKFQLAPDPPVQPPAGSLFLFDRKALRYFRKDGHKWRKKKDGKTVKEAHEKLKSGSVDVLHCYYAHGEDNDNFQR 114 5559***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylev 117 r+yw+L+e+le+ivlvhy+ev XP_022955592.1 115 RSYWMLDEQLEHIVLVHYREV 135 *****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 957 aa Download sequence
MAESRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF 60 DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML 120 DEQLEHIVLV HYREVNEGYR SGISRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP 180 LSPMQTVRSE NGGVDSSARN DSGISSDVHH VFKSSMLPAS LPAGDVSGSS DLCGQEIVII 240 QSAITDSITH KLIDARLASS GLVKNMVNSG HGLIADEEVP AAKAVSQRIV QVVDDSFVQV 300 EKTSKYDLNH EGFGELKKLD SFGRWMDKEI GRDCDDSLMT LDSGNYWCAL DAGNDEKEVS 360 SLSHHMQLDI DSLGPSLSQD QLFSISDFSP DWAYSGNVTK VLIVGSFLGS KKLPVETQWG 420 CMFGEVEVSA EVLSNSVLRC QTPLHAPGRI PFYVTCCNRL ACSEVREFEF REKLPTLSVP 480 NAIKCASEDE LRFQMRLTRL LNLCLEEKWL DCSIKNCEKC KIIGLMKSSR SDIAKWRMME 540 GISIPLISDG MNPRDFMIQT LLVDKLCEWL ACKVHEGTMG THVLDEEGLG VIHLAAALGY 600 AWTIGPIIAS GVSPNFRDSK GRTALHWASY FGREETVATL VRLGVSPGAV DDPTSGFPGG 660 QTAADLASSR GHKGIAGYLA EADLIAHLRS LTDGENLKDN VKENVNVDET IQTADVVSSQ 720 LAEDELLSLK GSLAAVRKSV HAAALIHAAF RARSFRHKQL MGSDKEMIHE ESVDLVALGI 780 LNKAEKIHYE DYLHVAAVRI QQNYRGWKGR KEFLKIRNRI VKIQAHVRGY QVRKLYRKVI 840 WTVSIVEKAI LRWRRKRVGL RGFKAEGATG EVASSHSQVE KSDDYEFLRI GRQLKYADVE 900 KALSRVKSMA RSPEARHQYM RLVTKFHIFK QINDEEPSGS NEDGSSQEIQ KEEQNLA

Sequence ? help Back to Top

Protein Sequence Length: 957 aa Download sequence

MAESRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF  60
DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML  120
DEQLEHIVLV HYREVNEGYR SGISRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP  180
LSPMQTVRSE NGGVDSSARN DSGISSDVHH VFKSSMLPAS LPAGDVSGSS DLCGQEIVII  240
QSAITDSITH KLIDARLASS GLVKNMVNSG HGLIADEEVP AAKAVSQRIV QVVDDSFVQV  300
EKTSKYDLNH EGFGELKKLD SFGRWMDKEI GRDCDDSLMT LDSGNYWCAL DAGNDEKEVS  360
SLSHHMQLDI DSLGPSLSQD QLFSISDFSP DWAYSGNVTK VLIVGSFLGS KKLPVETQWG  420
CMFGEVEVSA EVLSNSVLRC QTPLHAPGRI PFYVTCCNRL ACSEVREFEF REKLPTLSVP  480
NAIKCASEDE LRFQMRLTRL LNLCLEEKWL DCSIKNCEKC KIIGLMKSSR SDIAKWRMME  540
GISIPLISDG MNPRDFMIQT LLVDKLCEWL ACKVHEGTMG THVLDEEGLG VIHLAAALGY  600
AWTIGPIIAS GVSPNFRDSK GRTALHWASY FGREETVATL VRLGVSPGAV DDPTSGFPGG  660
QTAADLASSR GHKGIAGYLA EADLIAHLRS LTDGENLKDN VKENVNVDET IQTADVVSSQ  720
LAEDELLSLK GSLAAVRKSV HAAALIHAAF RARSFRHKQL MGSDKEMIHE ESVDLVALGI  780
LNKAEKIHYE DYLHVAAVRI QQNYRGWKGR KEFLKIRNRI VKIQAHVRGY QVRKLYRKVI  840
WTVSIVEKAI LRWRRKRVGL RGFKAEGATG EVASSHSQVE KSDDYEFLRI GRQLKYADVE  900
KALSRVKSMA RSPEARHQYM RLVTKFHIFK QINDEEPSGS NEDGSSQEIQ KEEQNLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.1	0.0	CAMTA family protein