PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022955725.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 759aa    MW: 84966.2 Da    PI: 6.6139
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022955725.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.71.3e-2095150156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     r+k +++t+eq++e+e+lF++++++++++r++L+k+lgL+ rqVk+WFqNrR++ k
  XP_022955725.1  95 RKKYHRHTNEQIREMEALFKESPHLDEKQRQQLSKRLGLSSRQVKFWFQNRRTQIK 150
                     7999************************************************9877 PP
2START2046.2e-642704916206
                     HHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS
           START   6 aaqelvkkalaeepgWvkss....esengdevlqkfeeskv.......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 
                     a++el ++a+a++p+Wv+s+    e++n+de+l++f  +++        ++ea+r++++v+m++ +lv++++d + qW+e+++    ka+t++vi
  XP_022955725.1 270 ALEELKTMAAAGDPLWVRSVetgrEILNYDEYLKTFHLNNNsnhrwlkTHIEASRETALVFMEPSRLVQSFMDEN-QWKEMFPfmisKAATVDVI 363
                     789999******************************998889*********************************.******************* PP

                     CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE-- CS
           START  86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlk 173
                     ++g      ga+qlm+ae q+l+plv+ R+ +f+Ry++ql a++w+i+dvS+++ ++++ + s+v+ +++pSg++i+++ ngh+kvt+veh +++
  XP_022955725.1 364 CNGgvanwdGAVQLMFAEVQMLTPLVStREMYFIRYCKQLDAERWAILDVSIENVEDNNIDVSLVKYRKRPSGCIIKDEFNGHCKVTMVEHLECQ 458
                     **********************************************************99*********************************** PP

                     SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 174 grlphwllrslvksglaegaktwvatlqrqcek 206
                     ++ +h+l+rslv++g  +gak+w+atlq qce+
  XP_022955725.1 459 KNKVHNLFRSLVNNGGGFGAKRWMATLQLQCER 491
                     *******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 759 aa     Download sequence    
MRADMSDNNN RLAFTKDFFS SPALSLTLAG IFRRGETGEK GDVEMEEVDD GRDDMTTAVE  60
VSSENSGPVR SRSDEDYDGG GVHEENDDGC HGKRRKKYHR HTNEQIREME ALFKESPHLD  120
EKQRQQLSKR LGLSSRQVKF WFQNRRTQIK AIQERHENTL LKAEMEKLRD ENKGMREISK  180
RKLGCPNCGT TDAGEDDVAS TTTEQLRIKN AKLKVEIEKL RAALGKHRHA AASPSYSSEN  240
EQETNQSCLD YYTGIFGLEK SRIMEKVHQA LEELKTMAAA GDPLWVRSVE TGREILNYDE  300
YLKTFHLNNN SNHRWLKTHI EASRETALVF MEPSRLVQSF MDENQWKEMF PFMISKAATV  360
DVICNGGVAN WDGAVQLMFA EVQMLTPLVS TREMYFIRYC KQLDAERWAI LDVSIENVED  420
NNIDVSLVKY RKRPSGCIIK DEFNGHCKVT MVEHLECQKN KVHNLFRSLV NNGGGFGAKR  480
WMATLQLQCE RLAFFMATNI PMKDSNGVAT LAGRKSTLKL AQRMSSSFSQ AIAASSYQTW  540
TKVVGKTGED IRVCSRKNLS DLGEPIGAIL CAVSSLWLPV SPDLLFHFLL DQARAIRWDA  600
MFGGDEAKSI ANLAKGQDRG NSVTIQTIGS KESNSSSGMW ILQDSSTNSS ESMVVYSGVD  660
VTGMQSVMTG CDSSSLTILP SGFSILPDGA VSRPPLLITR QKDDKTADTN GGVLLTVAVQ  720
ILTDASPSAK PTMESVEYVK NIICCTLKNI KTSMRCEED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein