PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022955821.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 189aa    MW: 20825.6 Da    PI: 6.5169
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022955821.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.97.1e-2070120155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+G+r+++ +g+W+AeIrdp     +  r++lg++ taeeAa a+++a+ +++g
  XP_022955821.1  70 TKYRGIRQRP-WGKWAAEIRDPQ----KgLRVWLGTYNTAEEAATAYDQAAVRIRG 120
                     69********.**********94....34************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MCGGAIISDP VVDPTFSDLL GLDHDLSANS SHPSQVKIEN PDGCEEAAPA PAPAEEVAGE  60
VKKPKKIRKT KYRGIRQRPW GKWAAEIRDP QKGLRVWLGT YNTAEEAATA YDQAAVRIRG  120
KKAKLNFTHP PPPPPPPPPP PPQQHLPPNN IQPTLESFLG LYPSPPVEPS ADPWWVDDLI  180
IYQQQNFQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.11e-27ERF family protein