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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | XP_022955849.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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| Family | HSF | ||||||||
| Protein Properties | Length: 292aa MW: 34252.9 Da PI: 9.0973 | ||||||||
| Description | HSF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HSF_DNA-bind | 110.8 | 9.7e-35 | 46 | 137 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96
Fl+k+ye +ed ++++++sws+ +nsfvv+d ++f+ ++LpkyFkh nf+SFvRQLn+YgF+kv+ ++ weF+h+sF +g+++ll+
XP_022955849.1 46 FLTKTYEFIEDTATDHIVSWSRGNNSFVVWDLQSFSLSLLPKYFKHCNFSSFVRQLNTYGFRKVDPDK---------WEFAHESFLRGQRHLLKL 131
9****************************************************************999.........****************** PP
XXXXXX CS
HSF_DNA-bind 97 ikrkks 102
i+r+k
XP_022955849.1 132 IRRRKA 137
***985 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 292 aa Download sequence |
MNFSRQVKEE FPASSSSFSG GVLPPTATPA PPQPMEGLHE AGPPPFLTKT YEFIEDTATD 60 HIVSWSRGNN SFVVWDLQSF SLSLLPKYFK HCNFSSFVRQ LNTYGFRKVD PDKWEFAHES 120 FLRGQRHLLK LIRRRKALQP NVYHQAPDPC IEVGRFGLDG EANRLQRDKQ VLMVEVVKLR 180 QQQQTMKTYL RTMERRLKKT ETKQQLMMNF LAKAIQNPDF IQHLIHQKHK NRELEDAINR 240 KRRRRIDQGQ LPVVNDVALD DQMNQKDKSL EKDDDLDERF WENLLNEANE DC |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 240 | 244 | RKRRR |
| 2 | 240 | 268 | RKRRRRIDQGQLPVVNDVALDDQMNQKDK |
| 3 | 241 | 246 | KRRRRI |
| 4 | 241 | 269 | RKRRRRIDQGQLPVVNDVALDDQMNQKDK |
| 5 | 242 | 270 | RKRRRRIDQGQLPVVNDVALDDQMNQKDK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G22830.1 | 1e-105 | HSF family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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