PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022955986.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 198aa    MW: 21793.1 Da    PI: 9.1931
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022955986.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.67.8e-0752901355
                    HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    R+++ ++f+ L++l+P++    s+K +  +i+ +++++I +Lq
  XP_022955986.1 52 RKEMSESFDVLQSLVPNL----SPKATRETIVSETIQFIEDLQ 90
                    99***************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MEACTDSVVS LLPHILPVHQ SEAAENKAST SRKRRRALEA NGGVQRKGRE KRKEMSESFD  60
VLQSLVPNLS PKATRETIVS ETIQFIEDLQ KQLMRLEMEK KPLESVTMLP STNSDSPGGG  120
VIVSVSSNIV LFGIIFASVR RGMVTQILMA FERHQAEVLA ANVAVSHGNL TLTVTASVHG  180
YVENTIEQIR NDILSLKK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13236RKRRR
24654RKGREKRKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-09bHLH family protein