PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022955992.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 300aa    MW: 32870.7 Da    PI: 8.1879
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022955992.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.26.3e-32144202159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+s++prsYYrCt+ gC vkk+ver ++d ++v++tYeg+H+h+
  XP_022955992.1 144 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERLSNDHSTVVTTYEGQHTHQ 202
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MDKKLEDTMM GSENSAGKYS PVGFSDDFPA TSFGSSNSFD LLGSGIDFYN PLSSLFDLVS  60
TTAPLLSSPA STVPESSEVV NAPPTPNSSS VSSYSNDAAA IDEVDKNNTE KPSSSNVLKP  120
KKKNQKKQRE PRFAFMTKSD IDHLDDGYRW RKYGQKAVKN SPYPRSYYRC TTVGCGVKKR  180
VERLSNDHST VVTTYEGQHT HQSPIMPRGS IRVIPGSNLD ITTTTGLLFQ PNTPQPFMYS  240
PPPPFLTINS LSTNPRPPSS FPPPPPPPPS SQASVLRDHG LLQDLVPLQM RKEPKDEENG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.11e-48WRKY family protein