PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022956014.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 225aa MW: 25270.7 Da PI: 9.3761

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022956014.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.2	1.5e-08	145	186	8	54
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + r+RR++i +++ L++l+P K++ a++L +A Y+k L XP_022956014.1 145 AARKRREKISEKIRALQRLVPGG-----SKMDTASMLDEAASYLKFL 186 669****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MDDLLWNGSW SNEEGNRCNE SLFVLDDPSR CSNLPLQELQ IVSKMSRLPE MAKDEGASME 60 DDKGIAPKGG VLDIFENQKP KQQNSTTSSS NNDQVKPFNR DRAMSQMKEL VYYAAVFRPV 120 SSGSETVEKK RRRNVKTSKE PQTVAARKRR EKISEKIRAL QRLVPGGSKM DTASMLDEAA 180 SYLKFLRAQI KALEGFSYKL GSIDCLSTST SFNPPFPTIN AYFPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	150	KKRRRNVKTSKEPQTVAARKRR
2	129	152	KKRRRNVKTSKEPQTVAARKRREK
3	130	151	KKRRRNVKTSKEPQTVAARKRR
4	130	153	KKRRRNVKTSKEPQTVAARKRREK
5	131	152	KKRRRNVKTSKEPQTVAARKRR
6	147	152	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	8e-33	bHLH family protein