PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022956040.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 274aa    MW: 31313.4 Da    PI: 7.6761
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022956040.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.91.8e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +grWT+eEdell ++++  G g+W++ ++  g+ R++k+c++rw +yl
   XP_022956040.1 14 KGRWTAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding50.93.6e-1667117148
                      TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T+eE++ +v++++ lG+     +W++Ia +++ gRt++++k++w+++l
   XP_022956040.1  67 RGNITPEEEQMIVKLHNVLGNSlfrfRWSAIAGHLP-GRTDNEIKNYWNSHL 117
                      7999*****************9**************.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MGRSPCCEKV GLRKGRWTAE EDELLTNYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRTNLKRGNI TPEEEQMIVK LHNVLGNSLF RFRWSAIAGH LPGRTDNEIK NYWNSHLSRR  120
IYTVTRPSAT KSSSPITCLL GIIPVPKRKR DVTCGRREEQ GGIVKGKEED DGKTLGKEVI  180
LRSIMGDGDG EGLGPYEWLD GEIMTLNNGM VKACGNQCMD EDHGNGYCSS SPFEKDQWLN  240
WEWEEYGSVH KGRFEKWELE DISSWLWKTD QIDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.11e-73MYB family protein