PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022956041.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 269aa    MW: 30662.7 Da    PI: 7.3391
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022956041.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.91.7e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +grWT+eEdell ++++  G g+W++ ++  g+ R++k+c++rw +yl
   XP_022956041.1 14 KGRWTAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding55.71.1e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T+eE++ +v++++ lG++ W++Ia +++ gRt++++k++w+++l
   XP_022956041.1  67 RGNITPEEEQMIVKLHNVLGNR-WSAIAGHLP-GRTDNEIKNYWNSHL 112
                      7999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MGRSPCCEKV GLRKGRWTAE EDELLTNYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRTNLKRGNI TPEEEQMIVK LHNVLGNRWS AIAGHLPGRT DNEIKNYWNS HLSRRIYTVT  120
RPSATKSSSP ITCLLGIIPV PKRKRDVTCG RREEQGGIVK GKEEDDGKTL GKEVILRSIM  180
GDGDGEGLGP YEWLDGEIMT LNNGMVKACG NQCMDEDHGN GYCSSSPFEK DQWLNWEWEE  240
YGSVHKGRFE KWELEDISSW LWKTDQIDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.13e-76MYB family protein