PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022956274.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 236aa    MW: 26792.3 Da    PI: 9.6304
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022956274.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.62.5e-49141381128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+ +yL kk+ +++l++  vi+++d+++++PwdLp      e+e yfFs+r+ ky++g+r+nrat sgyWkatg d++++s+
  XP_022956274.1  14 LPPGFRFHPTDEELILQYLIKKALSSPLPA-AVIPDADVCRFDPWDLPGD---LERERYFFSTRQAKYSNGRRSNRATGSGYWKATGIDRRIVSS 104
                     79****************************.89***************44...46899**********************************998 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++lvglkktLvfy+g+ p+g +tdWvmheyrl
  XP_022956274.1 105 kENRLVGLKKTLVFYTGNPPNGLRTDWVMHEYRL 138
                     67778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MENLTFLKNG VLRLPPGFRF HPTDEELILQ YLIKKALSSP LPAAVIPDAD VCRFDPWDLP  60
GDLERERYFF STRQAKYSNG RRSNRATGSG YWKATGIDRR IVSSKENRLV GLKKTLVFYT  120
GNPPNGLRTD WVMHEYRLVG DSEAPPSAIN GELPTLNHNW VLCRIFLKKS TKNRDEKKKI  180
CTPVFHQFLR ADLNLAAPCS SSSGSSGVTE ISVNNNHQEQ EQEETSSCHS LRNRRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.13e-86NAC family protein