PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022956308.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 278aa    MW: 30515.4 Da    PI: 9.7382
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022956308.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.92.3e-13556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT eE+e l+ +v+++G+g Wk I +        ++R+  ++k++w+++
   XP_022956308.1  5 KLKWTSEEEEALLAGVNKHGPGKWKNILKDPEfapslTHRSNIDLKDKWRNL 56
                     689***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGNQKLKWTS EEEEALLAGV NKHGPGKWKN ILKDPEFAPS LTHRSNIDLK DKWRNLSVST  60
ASQGSKEKSR APKAKAIVAA ISNHQNSAPA KFNASADTAG DDTPNNSTQD GKNVPRYYTM  120
IFEALSTIKD SNGCDIGTIV NFIKQRHEVP QNFRRQLSSK LRRLVSQGKL EKVQNCYQVK  180
KDNSLAVNTP TPKQKDVRQR ISQYTMGGGM PSGGDTLEDA AKAAAYKVAD AENKSFLAAE  240
AVKEAERIAK MAEDTDSMLQ IIKEIYEKCS GGESILLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72740.23e-77MYB_related family protein