PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022956453.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 298aa    MW: 32389.2 Da    PI: 9.2691
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022956453.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.91.1e-1397141347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_022956453.1  97 PWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 141
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MNAPRTCSLC GNNGHNSRTC PEGDGGGASG AGGFMLFGVR LTTTEGSSSF RKSVSMNNLS  60
QFDQPLSQDS NNADAGYASD DVVHPSDRCR GRKRGIPWTE EEHRLFLLGL QKVGKGDWRG  120
ISRNFVKTRT PTQVASHAQK YFLRRNNFNR RRRRSSLFDI TTDTFPSSSM EDDLVFSGHE  180
ALPPPLPPSQ PLKDNKPGNF LLKIHPVKPL PPAGDDSNAE NTISSKILRP IPMLPLSPYP  240
KFAQLNINDR TPEDPLPLTL KLSTSHPEAQ SPTAASQSSG SFQTMSGGGD SIDIVSVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.26e-64MYB_related family protein